Workshop Program

Workshop on Clinical Proteomics         

Date: March 27 - March 30, 2014

Timings: 9:00 AM onwards

Venue: Institute of Bioinformatics

Workshop Program

Day 1:
Tutorial Lectures
Mass spectrometry-based proteomics 
Quantitative proteomics 
Hands on training 
Sample prep I : In-gel and in-solution digestion 
Fractionation strategies - SCX/bRPLC 

Day 2:
Tutorial Lectures

Introduction to mass spectrometry data analysis
Hands on training
Sample prep II : peptide extraction and iTRAQ labeling
Fractionation: depletion strategies
Introduction to Mass spectrometry data analysis

Day 3:
Tutorial Lectures

Analysis of post-translational modifications
Operation of LC-MS/MS (demo)
Multiple reaction monitoring (demo)
Hands on training
Data analysis – quantitative proteomics
Phosphopeptide enrichment

Day 4:
Tutorial Lectures

Multipronged proteomic analysis
Biological interpretation of proteomics data (demo)
Introduction to metabolomics
Hands on training
Analysis of phosphoproteomic data
Biological interpretation of proteomics data